yojE [2019-08-28 10:07:47]

unknown

locus: BSU_19480

pI: 10.01

mw: 33.23 kDa

protein length: 298 aa

gene length: 897 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 2,123,026 → 2,123,922

The protein

Protein family

• [SW|EamA transporter family] (according to UniProt)

[SW|Domains]

• [SW|EamA domain] 1 (aa 17-148) (according to UniProt)
• [SW|EamA domain] 2 (aa 162-286) (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|FBF1A8C92149A216D8A46F9E02898D7C5C448E2A|yojE]-[gene|7922A49FBC7CCDC8C585EF6E67D7CC9CC91059F7|yoyC]-[gene|63EC848DB7CC4464B070E65D2C9288851B08BBE3|yojF]-[gene|8106404D9D2CFA0825E1284D47CC7198D8A20E5D|bshB2]
  description: [Pubmed|23894131]

  sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|23894131], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

  regulation

  • ''[protein|search|yoyC]'': induced by diamide stess (thiol depletion) ([protein|search|Spx]) [Pubmed|23894131]

Biological materials

Mutant

• MGNA-B430 (yojE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1429 NBRP B. subtilis, Japan]
• BKE19480 (Δ[gene|FBF1A8C92149A216D8A46F9E02898D7C5C448E2A|yojE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE19480 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGATATCCCTGCCTTTC, downstream forward: _UP4_TGAGGCCTTTGGCTTTTCAG
• BKK19480 (Δ[gene|FBF1A8C92149A216D8A46F9E02898D7C5C448E2A|yojE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK19480 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGATATCCCTGCCTTTC, downstream forward: _UP4_TGAGGCCTTTGGCTTTTCAG

References

• 23894131